Showing results 53 to 72 of 96
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| Issue Date | Title | Author(s) |
| 2009-01-01 | Lateral Transfer of Genes and Gene Fragments in Prokaryotes | Chan, CX; Beiko, RG; Darling, AE; Ragan, MA |
| 2009-01 | Lateral Transfer Of Genes And Gene Fragments In Prokaryotes | Chan, C; Beiko, R; Darling, AE; Ragan, M |
| 2018-07-03 | Local and relaxed clocks, the best of both worlds | Fourment, M; Darling, AE |
| 2018-01-01 | Local and relaxed clocks: The best of both worlds | Fourment, M; Darling, AE |
| 2011-10-01 | Mauve assembly metrics | Darling, AE; Tritt, A; Eisen, JA; Facciotti, MT |
| 2020-02-06 | Metagenomic Hi-C of a Healthy Human Fecal Microbiome Transplant Donor. | DeMaere, MZ; Liu, MYZ; Lin, E; Djordjevic, SP; Charles, IG; Worden, P; Burke, CM; Monahan, LG; Gardiner, M; Borody, TJ; Darling, AE |
| 2010-09-10 | Metagenomic sequencing of an in vitro-simulated microbial community | Morgan, JL; Darling, AE; Eisen, JA |
| 2013-01-15 | MetAMOS: A modular and open source metagenomic assembly and analysis pipeline | Treangen, TJ; Koren, S; Sommer, DD; Liu, B; Astrovskaya, I; Ondov, B; Darling, AE; Phillippy, AM; Pop, M |
| 2016-01-01 | A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq | Burke, CM; Darling, AE |
| 2018-05-05 | Near full-length 16S rRNA gene next-generation sequencing revealed Asaia as a common midgut bacterium of wild and domesticated Queensland fruit fly larvae | Deutscher, AT; Burke, CM; Darling, AE; Riegler, M; Reynolds, OL; Chapman, TA |
| 2009-04-01 | A novel heuristic for local multiple alignment of interspersed DNA repeats | Treangen, TJ; Darling, AE; Achaz, G; Ragan, MA; Messeguer, X; Rocha, EPC |
| 2018-05-01 | Online Bayesian phylogenetic inference: Theoretical foundations via sequential Monte Carlo | Dinh, V; Darling, AE; Matsen, FA |
| 2016-10-25 | Online Bayesian phylogenetic inference: theoretical foundations via Sequential Monte Carlo | Dinh, V; Darling, AE; Matsen, FA |
| 2022 | Phylogenetic diversity analysis of shotgun metagenomic reads describes gut microbiome development and treatment effects in the post-weaned pig. | Gaio, D; DeMaere, MZ; Anantanawat, K; Eamens, GJ; Falconer, L; Chapman, TA; Djordjevic, S; Darling, AE |
| 2014-01-01 | Phylogenetically Driven Sequencing of Extremely Halophilic Archaea Reveals Strategies for Static and Dynamic Osmo-response | Becker, EA; Seitzer, PM; Tritt, A; Larsen, D; Krusor, M; Yao, AI; Wu, D; Madern, D; Eisen, JA; Darling, AE; Facciotti, MT |
| 2013-04-25 | Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices | Lang, JM; Darling, AE; Eisen, JA |
| 2014-01-01 | PhyloSift: Phylogenetic analysis of genomes and metagenomes | Darling, AE; Jospin, G; Lowe, E; Matsen, FA; Bik, HM; Eisen, JA |
| 2017-12-01 | Porcine commensal escherichia coli: A reservoir for class 1 integrons associated with IS26 | Reid, CJ; Wyrsch, ER; Chowdhury, PR; Zingali, T; Liu, M; Darling, AE; Chapman, TA; Djordjevic, SP |
| 2017-12 | Porcine commensal Escherichia coli: a reservoir for class 1 integrons associated with IS26. | Reid, CJ; Wyrsch, ER; Roy Chowdhury, P; Zingali, T; Liu, M; Darling, AE; Chapman, TA; Djordjevic, SP |
| 2021-08-09 | Post-weaning shifts in microbiome composition and metabolism revealed by over 25 000 pig gut metagenome-assembled genomes. | Gaio, D; DeMaere, MZ; Anantanawat, K; Chapman, TA; Djordjevic, SP; Darling, AE |
