Browsing by Author Darling, A

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Showing results 1 to 20 of 20
Issue DateTitleAuthor(s)
2010The Amphimedon Queenslandica Genome And The Evolution Of Animal ComplexitySrivastava, M; Simakov, O; Chapman, J; Fahey, B; Gauthier, M; Mitros, T; Richards, G; Conaco, C; Dacre, M; Hellsten, U; Larroux, C; Putnam, N; Stanke, M; Adamska, M; Darling, A; Degnan, S; Oakley, T; Plachetzki, D; Zhai, Y; Adamski, M; Calcino, A
1-Dec-2011Assemblathon 1: A competitive assessment of de novo short read assembly methodsEarl, D; Bradnam, K; St. John, J; Darling, A; Lin, D; Fass, J; Yu, HOK; Buffalo, V; Zerbino, DR; Diekhans, M; Nguyen, N; Ariyaratne, PN; Sung, WK; Ning, Z; Haimel, M; Simpson, JT; Fonseca, NA; Birol, I; Docking, TR; Ho, IY; Rokhsar, DS; Chikhi, R; Lavenier, D; Chapuis, G; Naquin, D; Maillet, N; Schatz, MC; Kelley, DR; Phillippy, AM; Koren, S; Yang, SP; Wu, W; Chou, WC; Srivastava, A; Shaw, TI; Ruby, JG; Skewes-Cox, P; Betegon, M; Dimon, MT; Solovyev, V; Seledtsov, I; Kosarev, P; Vorobyev, D; Ramirez-Gonzalez, R; Leggett, R; MacLean, D; Xia, F; Luo, R; Li, Z; Xie, Y; Liu, B; Gnerre, S; MacCallum, I; Przybylski, D; Ribeiro, FJ; Sharpe, T; Hall, G; Kersey, PJ; Durbin, R; Jackman, SD; Chapman, JA; Huang, X; DeRisi, JL; Caccamo, M; Li, Y; Jaffe, DB; Green, RE; Haussler, D; Korf, I; Paten, B
1-Jan-2012BEAGLE: An application programming interface and high-performance computing library for statistical phylogeneticsAyres, DL; Darling, A; Zwickl, DJ; Beerli, P; Holder, MT; Lewis, PO; Huelsenbeck, JP; Ronquist, F; Swofford, DL; Cummings, MP; Rambaut, A; Suchard, MA
2019bin3C : Exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomes (MAGs)DeMaere, M; Darling, A
1-May-2003Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457TWei, J; Goldberg, MB; Burland, V; Venkatesan, MM; Deng, W; Fournier, G; Mayhew, GF; Plunkett, G; Rose, DJ; Darling, A; Mau, B; Perna, NT; Payne, SM; Runyen-Janecky, LJ; Zhou, S; Schwartz, DC; Blattner, FR
5-Mar-2014Diversification of a single ancestral gene into a successful toxin superfamily in highly venomous Australian funnel-web spidersPineda, SS; Sollod, BL; Wilson, D; Darling, A; Sunagar, K; Undheim, EAB; Kely, L; Antunes, A; Fry, BG; King, GF
1-Jan-2013Indigenous Vibrio cholerae strains from a non-endemic region are pathogenicIslam, A; Labbate, M; Djordjevic, SP; Alam, M; Darling, A; Melvold, J; Holmes, AJ; Johura, FT; Cravioto, A; Charles, IG; Stokes, HW
2010Inference Of Homologous Recombination In Bacteria Using Whole-genome SequencesDidelot, X; Lawson, D; Darling, A; Falush, D
1-Feb-2009Inferring genomic flux in bacteriaDidelot, X; Darling, A; Falush, D
12-Feb-2013Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequenceRands, CM; Darling, A; Fujita, M; Kong, L; Webster, MT; Clabaut, C; Emes, RD; Heger, A; Meader, S; Hawkins, MB; Eisen, MB; Teiling, C; Affourtit, J; Boese, B; Grant, PR; Grant, BR; Eisen, JA; Abzhanov, A; Ponting, CP
15-Jul-2013Insights into the phylogeny and coding potential of microbial dark matterRinke, C; Schwientek, P; Sczyrba, A; Ivanova, NN; Anderson, IJ; Cheng, JF; Darling, A; Malfatti, S; Swan, BK; Gies, EA; Dodsworth, JA; Hedlund, BP; Tsiamis, G; Sievert, SM; Liu, WT; Eisen, JA; Hallam, SJ; Kyrpides, NC; Stepanauskas, R; Rubin, EM; Hugenholtz, P; Woyke, T
21-Mar-2018Local and relaxed clocks, the best of both worldsFourment, M; Darling, A
1-Jan-2017A longitudinal study of the diabetic skin and wound microbiomeGardiner, M; Vicaretti, M; Sparks, J; Bansal, S; Bush, S; Liu, M; Darling, A; Harry, E; Burke, CM
1-Jan-2016The metagenomics and metadesign of the subways and Urban biomes (MetaSUB) international consortium inaugural meeting reportAfshinnekoo, E; Ahsanuddin, S; Ghedin, E; Read, T; Fraser, C; Dudley, J; Bowler, C; Mason, CE; Chernomoretz, A; Stolovitzky, G; Łabaj, PP; Graf, AB; Darling, A; Burke, C; Noushmehr, H; Dias-Neto, E; Guo, Y; Xie, Z; Lee, PKH; Shi, L; Ruiz-Perez, CA; Zambrano, MM; Siam, R; Ouf, A; Richard, H; Lafontaine, I; Wieler, LH; Semmler, T; Prithiviraj, B; Nedunuri, N; Mehr, S; Banihashemi, K; Lista, F; Anselmo, A; Suzuki, H; Kuroda, M; Yamashita, R; Sato, Y; Kaminuma, E; Aranda, CMA; Martinez, J; Dada, C; Dybwad, M; Oliveira, M; Schuster, S; Siwo, GH; Jang, S; Seo, SC; Hwang, SH; Ossowski, S; Bezdan, D; Chaker, S; Chatziefthimiou, AD; Udekwu, K; Liungdahl, P; Sezerman, U; Meydan, C; Elhaik, E; Gonnet, G; Schriml, LM; Mongodin, E; Huttenhower, C; Gilbert, J; Eisen, J; Hirschberg, D; Hernandez, M; McGrath, K; McGrath, L; Gray, A; Osuolale, O; Segata, N; Fillo, S; Iraola, G; Zhou, Y; Chang, Y; Li, Y; Zhend, Y; Hou, W; Ramirez, A; Cepeda, M; Desnues, C; Rascovan, N; Baron, C; Nagarajan, N; Ercolini, D; Menary, W; Tighe, S; Donia, M; Levy, S; Benito, J; Jones, A; Kasarskis, A; Maritz, J; Jorgensen, E; Neches, R; Livelli, T; Barnetche, JM; Pasolli, E; Greenfield, N; Hasan, N
1-May-2012Mrbayes 3.2: Efficient bayesian phylogenetic inference and model choice across a large model spaceRonquist, F; Teslenko, M; Van Der Mark, P; Ayres, DL; Darling, A; Höhna, S; Larget, B; Liu, L; Suchard, MA; Huelsenbeck, JP
7-Aug-2018Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiotaVan Deynze, A; Zamora, P; Delaux, PM; Heitmann, C; Jayaraman, D; Rajasekar, S; Graham, D; Maeda, J; Gibson, D; Schwartz, KD; Berry, AM; Bhatnagar, S; Jospin, G; Darling, A; Jeannotte, R; Lopez, J; Weimer, BC; Eisen, JA; Shapiro, HY; Ané, JM; Bennett, AB
1-Feb-2012Patterns of gene flow define species of thermophilic ArchaeaCadillo-Quiroz, H; Didelot, X; Held, NL; Herrera, A; Darling, A; Reno, ML; Krause, DJ; Whitaker, RJ
1-Apr-2009Phylogenetic and molecular analysis of hydrogen-producing green algaeTimmins, M; Thomas-Hall, SR; Darling, A; Zhang, E; Hankamer, B; Marx, UC; Schenk, PM
3-Jul-2017Porcine commensal Escherichia coli: A reservoir for class 1 integrons associated with IS26Reid, C; Wyrsch, E; Roy Chowdhury, P; Zingali, T; Liu, M; Darling, A; Chapman, T; Djordjevic, S
24-Jul-2012Sequencing of seven haloarchaeal genomes reveals patterns of genomic fluxLynch, EA; Langille, MGI; Darling, A; Wilbanks, EG; Haltiner, C; Shao, KSY; Starr, MO; Teiling, C; Harkins, TT; Edwards, RA; Eisen, JA; Facciotti, MT