Browsing by Author Darling, AE

Showing results 1 to 20 of 61  next >
Issue DateTitleAuthor(s)
20-Jul-2018Visualization of Biomedical DataO'Donoghue, SI; Baldi, BF; Clark, SJ; Darling, AE; Hogan, JM; Kaur, S; Maier-Hein, L; McCarthy, DJ; Moore, WJ; Stenau, E; Swedlow, JR; Vuong, J; Procter, JB
5-May-2018Near full-length 16S rRNA gene next-generation sequencing revealed Asaia as a common midgut bacterium of wild and domesticated Queensland fruit fly larvaeDeutscher, AT; Burke, CM; Darling, AE; Riegler, M; Reynolds, OL; Chapman, TA
1-May-2018Online Bayesian phylogenetic inference: Theoretical foundations via sequential Monte CarloDinh, V; Darling, AE; Matsen, FA
1-May-2018Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposalsFourment, M; Claywell, BC; Dinh, V; McCoy, C; Matsen, FA; Darling, AE
27-Apr-2018Analysis of Theileria orientalis draft genome sequences reveals potential species-level divergence of the Ikeda, Chitose and Buffeli genotypesBogema, DR; Micallef, ML; Liu, M; Padula, MP; Djordjevic, SP; Darling, AE; Jenkins, C
13-Apr-2018CAMISIM: Simulating metagenomes and microbial communitiesDarling, AE; Fritz, A; Hofmann, P; Majda, S; Dahms, E; Droge, J; Fiedler, J; Lesker, TR; Belmann, P; DeMaere, MZ; Sczyrba, A; Bremges, A; McHardy, AC
1-Jan-2018Local and relaxed clocks: The best of both worldsFourment, M; Darling, AE
1-Jan-2018Sim3C: Simulation of Hi-C and Meta3C proximity ligation sequencing technologiesDeMaere, MZ; Darling, AE
1-Dec-2017Porcine commensal Escherichia coli: a reservoir for class 1 integrons associated with IS26Reid, CJ; Wyrsch, ER; Chowdhury, PR; Zingali, T; Liu, M; Darling, AE; Chapman, TA; Djordjevic, SP
Dec-2017Porcine commensal Escherichia coli: a reservoir for class 1 integrons associated with IS26.Reid, CJ; Wyrsch, ER; Roy Chowdhury, P; Zingali, T; Liu, M; Darling, AE; Chapman, TA; Djordjevic, SP
21-Sep-2017DESMAN: A new tool for de novo extraction of strains from metagenomesQuince, C; Delmont, TO; Raguideau, S; Alneberg, J; Darling, AE; Collins, G; Eren, AM
2-Jun-2017Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposalsDarling, AE; Fourment, M
25-May-2017The impact of migratory flyways on the spread of avian influenza virus in North AmericaFourment, M; Darling, AE; Holmes, EC
16-May-2017Evaluation of ddRADseq for reduced representation metagenome sequencingDarling, AE; Liu, M; Worden, P; Monahan, L; Demaere, M; Burke, C; Djordjevic, S; Charles, I
15-May-2017Sim3C: simulation of HiC and Meta3C proximity ligation sequencing technologiesDarling, AE; DeMaere, M
9-Jan-2017Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics softwareDarling, AE
1-Jan-2017The rapid in vivo evolution of Pseudomonas aeruginosa in ventilator-associated pneumonia patients leads to attenuated virulenceWang, K; Chen, YQ; Salido, MM; Kohli, GS; Kong, JL; Liang, HJ; Yao, ZT; Xie, YT; Wu, HY; Cai, SQ; Drautz-Moses, DI; Darling, AE; Schuster, SC; Yang, L; Ding, Y
1-Jan-2017Evaluation of ddRADseq for reduced representation metagenome sequencingLiu, MY; Worden, P; Monahan, LG; DeMaere, MZ; Burke, CM; Djordjevic, SP; Charles, IG; Darling, AE
1-Jan-2016Deconvoluting simulated metagenomes: The performance of hard- and softclustering algorithms applied to metagenomic chromosome conformation capture (3C)DeMaere, MZ; Darling, AE
1-Jan-2016Draft genome sequences of 26 Porphyromonas strains isolated from the canine oral microbiomeCoil, DA; Alexiev, A; Wallis, C; O'Flynn, C; Deusch, O; Davis, I; Horsfall, A; Kirkwood, N; Jospin, G; Eisen, JA; Harris, S; Darling, AE