| Issue Date | Title | Author(s) |
| 2016-03-12 | Comparative genomic analysis of toxin-negative strains of Clostridium difficile from humans and animals with symptoms of gastrointestinal disease | Roy Chowdhury, P; Demaere, M; Chapman, T; Worden, P; Charles, IG; Darling, AE; Djordjevic, SP |
| 2009-04-01 | A novel heuristic for local multiple alignment of interspersed DNA repeats | Treangen, TJ; Darling, AE; Achaz, G; Ragan, MA; Messeguer, X; Rocha, EPC |
| 2008-01-01 | Enteropathogen Resource Integration Center (ERIC): Bioinformatics support for research on biodefense-relevant enterobacteria | Glasner, JD; Plunkett, G; Anderson, BD; Baumler, DJ; Biehl, BS; Burland, V; Cabot, EL; Darling, AE; Mau, B; Neeno-Eckwall, EC; Pot, D; Qiu, Y; Rissman, AI; Worzella, S; Zaremba, S; Fedorko, J; Hampton, T; Liss, P; Rusch, M; Shaker, M; Shaull, L; Shetty, P; Thotakura, S; Whitmore, J; Blattner, FR; Greene, JM; Perna, NT |
| 2018-07-20 | Visualization of Biomedical Data | O'Donoghue, SI; Baldi, BF; Clark, SJ; Darling, AE; Hogan, JM; Kaur, S; Maier-Hein, L; McCarthy, DJ; Moore, WJ; Stenau, E; Swedlow, JR; Vuong, J; Procter, JB |
| 2018-07-03 | Local and relaxed clocks, the best of both worlds | Fourment, M; Darling, AE |
| 2017-01-01 | The rapid in vivo evolution of Pseudomonas aeruginosa in ventilator-associated pneumonia patients leads to attenuated virulence | Wang, K; Chen, YQ; Salido, MM; Kohli, GS; Kong, JL; Liang, HJ; Yao, ZT; Xie, YT; Wu, HY; Cai, SQ; Drautz-Moses, DI; Darling, AE; Schuster, SC; Yang, L; Ding, Y |
| 2012-10-01 | Hidden breakpoints in genome alignments | Kehr, B; Reinert, K; Darling, AE |
| 2009 | Are protein domains modules of lateral genetic transfer? | Chan, CX; Darling, AE; Beiko, RG; Ragan, MA |
| 2014-01-01 | PhyloSift: Phylogenetic analysis of genomes and metagenomes | Darling, AE; Jospin, G; Lowe, E; Matsen, FA; Bik, HM; Eisen, JA |
| 2014-01-01 | Alignathon: A competitive assessment of whole-genome alignment methods | Earl, D; Nguyen, N; Hickey, G; Harris, RS; Fitzgerald, S; Beal, K; Seledtsov, I; Molodtsov, V; Raney, BJ; Clawson, H; Kim, J; Kemena, C; Chang, JM; Erb, I; Poliakov, A; Hou, M; Herrero, J; Kent, WJ; Solovyev, V; Darling, AE; Ma, J; Notredame, C; Brudno, M; Dubchak, I; Haussler, D; Paten, B |
