| Issue Date | Title | Author(s) |
| 2015-12-12 | Plastome organization and evolution of chloroplast genes in Cardamine species adapted to contrasting habitats | Hu, S; Sablok, G; Wang, B; Qu, D; Barbaro, E; Viola, R; Li, M; Varotto, C |
| 2011-10-05 | The rise and fall of breakpoint reuse depending on genome resolution | Attie, O; Darling, AE; Yancopoulos, S |
| 2013-02-12 | Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence | Rands, CM; Darling, A; Fujita, M; Kong, L; Webster, MT; Clabaut, C; Emes, RD; Heger, A; Meader, S; Hawkins, MB; Eisen, MB; Teiling, C; Affourtit, J; Boese, B; Grant, PR; Grant, BR; Eisen, JA; Abzhanov, A; Ponting, CP |
| 2004-07-01 | Mauve: Multiple alignment of conserved genomic sequence with rearrangements | Darling, ACE; Mau, B; Blattner, FR; Perna, NT |
| 2009-08-01 | Reordering contigs of draft genomes using the Mauve Aligner | Rissman, AI; Mau, B; Biehl, BS; Darling, AE; Glasner, JD; Perna, NT |
| 2015-11-01 | An experimentally supported model of the Bacillus subtilis global transcriptional regulatory network | Arrieta-Ortiz, ML; Hafemeister, C; Bate, AR; Chu, T; Greenfield, A; Shuster, B; Barry, SN; Gallitto, M; Liu, B; Kacmarczyk, T; Santoriello, F; Chen, J; Rodrigues, CD; Sato, T; Rudner, DZ; Driks, A; Bonneau, R; Eichenberger, P |
| 2009-04-01 | A novel heuristic for local multiple alignment of interspersed DNA repeats | Treangen, TJ; Darling, AE; Achaz, G; Ragan, MA; Messeguer, X; Rocha, EPC |
| 2019-01-01 | BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis | Bouckaert, R; Vaughan, TG; Barido-Sottani, J; Duchêne, S; Fourment, M; Gavryushkina, A; Heled, J; Jones, G; Kühnert, D; De Maio, N; Matschiner, M; Mendes, FK; Müller, NF; Ogilvie, HA; Du Plessis, L; Popinga, A; Rambaut, A; Rasmussen, D; Siveroni, I; Suchard, MA; Wu, CH; Xie, D; Zhang, C; Stadler, T; Drummond, AJ |
| 2014-01-14 | Genome sequencing and comparative analysis of three Chlamydia pecorum strains associated with different pathogenic outcomes | Sait, M; Livingstone, M; Clark, EM; Wheelhouse, N; Spalding, L; Markey, B; Magnino, S; Lainson, FA; Myers, GSA; Longbottom, D |
| 2019-02-20 | Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress | Aguilar, C; Raina, JB; Fôret, S; Hayward, DC; Lapeyre, B; Bourne, DG; Miller, DJ |
