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Issue DateTitleAuthor(s)
2011-12-01Assemblathon 1: A competitive assessment of de novo short read assembly methodsEarl, D; Bradnam, K; St. John, J; Darling, A; Lin, D; Fass, J; Yu, HOK; Buffalo, V; Zerbino, DR; Diekhans, M; Nguyen, N; Ariyaratne, PN; Sung, WK; Ning, Z; Haimel, M; Simpson, JT; Fonseca, NA; Birol, I; Docking, TR; Ho, IY; Rokhsar, DS; Chikhi, R; Lavenier, D; Chapuis, G; Naquin, D; Maillet, N; Schatz, MC; Kelley, DR; Phillippy, AM; Koren, S; Yang, SP; Wu, W; Chou, WC; Srivastava, A; Shaw, TI; Ruby, JG; Skewes-Cox, P; Betegon, M; Dimon, MT; Solovyev, V; Seledtsov, I; Kosarev, P; Vorobyev, D; Ramirez-Gonzalez, R; Leggett, R; MacLean, D; Xia, F; Luo, R; Li, Z; Xie, Y; Liu, B; Gnerre, S; MacCallum, I; Przybylski, D; Ribeiro, FJ; Sharpe, T; Hall, G; Kersey, PJ; Durbin, R; Jackman, SD; Chapman, JA; Huang, X; DeRisi, JL; Caccamo, M; Li, Y; Jaffe, DB; Green, RE; Haussler, D; Korf, I; Paten, B
2019-05-01Simplified transformation of ostreococcus tauri using polyethylene glycolSanchez, F; Geffroy, S; Norest, M; Yau, S; Moreau, H; Grimsley, N
2012-06-01Are humans increasing bacterial evolvability?Gillings, MR; Stokes, HW
2011-10-05The rise and fall of breakpoint reuse depending on genome resolutionAttie, O; Darling, AE; Yancopoulos, S
2009-08-01Reordering contigs of draft genomes using the Mauve AlignerRissman, AI; Mau, B; Biehl, BS; Darling, AE; Glasner, JD; Perna, NT
2013-04-30Genome-wide diel growth state transitions in the diatom Thalassiosira pseudonanaAshworth, J; Coesel, S; Lee, A; Armbrust, EV; Orellana, MV; Baliga, NS
2014-06-17Standardized metadata for human pathogen/vector genomic sequencesDugan, VG; Emrich, SJ; Giraldo-Calderón, GI; Harb, OS; Newman, RM; Pickett, BE; Schriml, LM; Stockwell, TB; Stoeckert, CJ; Sullivan, DE; Singh, I; Ward, DV; Yao, A; Zheng, J; Barrett, T; Birren, B; Brinkac, L; Bruno, VM; Caler, E; Chapman, S; Collins, FH; Cuomo, CA; Di Francesco, V; Durkin, S; Eppinger, M; Feldgarden, M; Fraser, C; Fricke, WF; Giovanni, M; Henn, MR; Hine, E; Hotopp, JD; Karsch-Mizrachi, I; Kissinger, JC; Lee, EM; Mathur, P; Mongodin, EF; Murphy, CI; Myers, G; Neafsey, DE; Nelson, KE; Nierman, WC; Puzak, J; Rasko, D; Roos, DS; Sadzewicz, L; Silva, JC; Sobral, B; Squires, RB; Stevens, RL; Tallon, L; Tettelin, H; Wentworth, D; White, O; Will, R; Wortman, J; Zhang, Y; Scheuermann, RH
2015-01-01Single Strand Annealing Plays a Major Role in RecA-Independent Recombination between Repeated Sequences in the Radioresistant Deinococcus radiodurans BacteriumIthurbide, S; Bentchikou, E; Coste, G; Bost, B; Servant, P; Sommer, S
2009Are protein domains modules of lateral genetic transfer?Chan, CX; Darling, AE; Beiko, RG; Ragan, MA
2014-01-01Alignathon: A competitive assessment of whole-genome alignment methodsEarl, D; Nguyen, N; Hickey, G; Harris, RS; Fitzgerald, S; Beal, K; Seledtsov, I; Molodtsov, V; Raney, BJ; Clawson, H; Kim, J; Kemena, C; Chang, JM; Erb, I; Poliakov, A; Hou, M; Herrero, J; Kent, WJ; Solovyev, V; Darling, AE; Ma, J; Notredame, C; Brudno, M; Dubchak, I; Haussler, D; Paten, B
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