| Issue Date | Title | Author(s) |
| 2005-01-05 | Visualization of comparative genomic analyses by BLAST score ratio | Rasko, DA; Myers, GSA; Ravel, J |
| 2017-07-01 | In Vitro and In Vivo Metabolite Identification Studies for the New Synthetic Opioids Acetylfentanyl, Acrylfentanyl, Furanylfentanyl, and 4-Fluoro-Isobutyrylfentanyl | Watanabe, S; Vikingsson, S; Roman, M; Green, H; Kronstrand, R; Wohlfarth, A |
| 2009-04-07 | Seevolution: Visualizing chromosome evolution | Esteban-Marcos, A; Darling, AE; Ragan, MA |
| 2014-01-01 | Circleator: Flexible circular visualization of genome-associated data with BioPerl and SVG | Crabtree, J; Agrawal, S; Mahurkar, A; Myers, GS; Rasko, DA; White, O |
| 2017-09-21 | DESMAN: A new tool for de novo extraction of strains from metagenomes | Quince, C; Delmont, TO; Raguideau, S; Alneberg, J; Darling, AE; Collins, G; Eren, AM |
| 2009-07-01 | Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH) | Chaudhuri, RR; Allen, AG; Owen, PJ; Shalom, G; Stone, K; Harrison, M; Burgis, TA; Lockyer, M; Garcia-Lara, J; Foster, SJ; Pleasance, SJ; Peters, SE; Maskell, DJ; Charles, IG |
| 2019-02-26 | Bin3C: Exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomes | Demaere, MZ; Darling, AE |
| 2011-04-01 | Easyfig: A genome comparison visualizer | Sullivan, MJ; Petty, NK; Beatson, SA |
| 2012-01-01 | BEAGLE: An application programming interface and high-performance computing library for statistical phylogenetics | Ayres, DL; Darling, A; Zwickl, DJ; Beerli, P; Holder, MT; Lewis, PO; Huelsenbeck, JP; Ronquist, F; Swofford, DL; Cummings, MP; Rambaut, A; Suchard, MA |
| 2015-01-01 | SplicingTypesAnno: Annotating and quantifying alternative splicing events for RNA-Seq data | Sun, X; Zuo, F; Ru, Y; Guo, J; Yan, X; Sablok, G |
