Visualization and analysis of 3D microscopic images
- Publication Type:
- Journal Article
- PLoS Computational Biology, 2012, 8 (6)
- Issue Date:
In a wide range of biological studies, it is highly desirable to visualize and analyze three-dimensional (3D) microscopic images. In this primer, we first introduce several major methods for visualizing typical 3D images and related multi-scale, multi-time-point, multi-color data sets. Then, we discuss three key categories of image analysis tasks, namely segmentation, registration, and annotation. We demonstrate how to pipeline these visualization and analysis modules using examples of profiling the single-cell gene-expression of C. elegans and constructing a map of stereotyped neurite tracts in a fruit fly brain. © 2012 Long et al.
Please use this identifier to cite or link to this item: