Biodegradation of phthalic acid esters by a novel marine bacterial strain RL-BY03: Characterization, metabolic pathway, bioaugmentation and genome analysis.
- Publisher:
- Elsevier
- Publication Type:
- Journal Article
- Citation:
- Chemosphere, 2024, 366, pp. 143530
- Issue Date:
- 2024-10
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Biodegradation of phthalic acid esters by a novel marine bacterial strain RL-BY03 Characterization, metabolic pathway, bioaugmentation and genome analysis.pdf | Accepted version | 11.8 MB |
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Full metadata record
Field | Value | Language |
---|---|---|
dc.contributor.author | Ren, L | |
dc.contributor.author | Wang, X | |
dc.contributor.author | Zhou, JL | |
dc.contributor.author | Jia, Y | |
dc.contributor.author | Hu, H | |
dc.contributor.author | Li, C | |
dc.contributor.author | Lin, Z | |
dc.contributor.author | Liang, M | |
dc.contributor.author | Wang, Y | |
dc.date.accessioned | 2025-03-17T07:15:10Z | |
dc.date.available | 2024-10-11 | |
dc.date.available | 2025-03-17T07:15:10Z | |
dc.date.issued | 2024-10 | |
dc.identifier.citation | Chemosphere, 2024, 366, pp. 143530 | |
dc.identifier.issn | 0045-6535 | |
dc.identifier.issn | 1879-1298 | |
dc.identifier.uri | http://hdl.handle.net/10453/185910 | |
dc.description.abstract | Biodegradation is recognized as the main route for the decomposition of phthalic acid esters (PAEs) in nature, but the fate of PAEs in marine ecosystems is not well understood. Herein, a novel marine bacterium, Gordonia sihwaniensis RL-BY03, was identified and analyzed for its ability to degrade PAEs. Furthermore, the metabolic mechanism of di-(2-ethylhexyl) phthalate (DEHP) was examined through UPLC-MS/MS and genomic analysis. RL-BY03 could rely solely on several types of PAEs as its sole carbon source. Initial pH and temperature for DEHP degradation were optimized as 8.0 and 30 °C, respectively. Surprisingly, RL-BY03 could simultaneously degrade ethyl acetate and DEHP and they could increase the cell surface hydrophobicity. DEHP degradation kinetics fitted well with the first-order decay model. The metabolic pathway of DEHP was deduced following the detection of five metabolic intermediates. Further, genes that are related to DEHP degradation were identified through genomic analysis and their expression levels were validated through RT-qPCR. A co-related metabolic pathway at biochemical and molecular level indicated that DEHP was turned into DBP and DEP by β-oxidation, which was further hydrolyzed into phthalic acid. Phthalic acid was utilized through catechol branch of β-ketoadipate pathway. Additionally, RL-BY03 exhibited excellent bioremediation potential for DEHP-contaminated marine samples. In general, these findings have the potential to enhance our understanding of the fate of PAEs in marine ecosystems. | |
dc.format | Print-Electronic | |
dc.language | eng | |
dc.publisher | Elsevier | |
dc.relation.ispartof | Chemosphere | |
dc.relation.isbasedon | 10.1016/j.chemosphere.2024.143530 | |
dc.rights | info:eu-repo/semantics/closedAccess | |
dc.subject.classification | Environmental Sciences | |
dc.subject.classification | Meteorology & Atmospheric Sciences | |
dc.subject.mesh | Biodegradation, Environmental | |
dc.subject.mesh | Phthalic Acids | |
dc.subject.mesh | Esters | |
dc.subject.mesh | Metabolic Networks and Pathways | |
dc.subject.mesh | Diethylhexyl Phthalate | |
dc.subject.mesh | Water Pollutants, Chemical | |
dc.subject.mesh | Gordonia Bacterium | |
dc.subject.mesh | Genome, Bacterial | |
dc.subject.mesh | Seawater | |
dc.subject.mesh | Gordonia Bacterium | |
dc.subject.mesh | Phthalic Acids | |
dc.subject.mesh | Diethylhexyl Phthalate | |
dc.subject.mesh | Esters | |
dc.subject.mesh | Water Pollutants, Chemical | |
dc.subject.mesh | Seawater | |
dc.subject.mesh | Genome, Bacterial | |
dc.subject.mesh | Biodegradation, Environmental | |
dc.subject.mesh | Metabolic Networks and Pathways | |
dc.subject.mesh | Biodegradation, Environmental | |
dc.subject.mesh | Phthalic Acids | |
dc.subject.mesh | Esters | |
dc.subject.mesh | Metabolic Networks and Pathways | |
dc.subject.mesh | Diethylhexyl Phthalate | |
dc.subject.mesh | Water Pollutants, Chemical | |
dc.subject.mesh | Gordonia Bacterium | |
dc.subject.mesh | Genome, Bacterial | |
dc.subject.mesh | Seawater | |
dc.title | Biodegradation of phthalic acid esters by a novel marine bacterial strain RL-BY03: Characterization, metabolic pathway, bioaugmentation and genome analysis. | |
dc.type | Journal Article | |
utslib.citation.volume | 366 | |
utslib.location.activity | England | |
pubs.organisational-group | University of Technology Sydney | |
pubs.organisational-group | University of Technology Sydney/Faculty of Engineering and Information Technology | |
pubs.organisational-group | University of Technology Sydney/Faculty of Engineering and Information Technology/School of Civil and Environmental Engineering | |
pubs.organisational-group | University of Technology Sydney/UTS Groups | |
pubs.organisational-group | University of Technology Sydney/UTS Groups/Centre for Technology in Water and Wastewater (CTWW) | |
pubs.organisational-group | University of Technology Sydney/UTS Groups/Centre for Green Technology (CGT) | |
utslib.copyright.status | closed_access | * |
dc.date.updated | 2025-03-17T07:15:03Z | |
pubs.publication-status | Published | |
pubs.volume | 366 |
Abstract:
Biodegradation is recognized as the main route for the decomposition of phthalic acid esters (PAEs) in nature, but the fate of PAEs in marine ecosystems is not well understood. Herein, a novel marine bacterium, Gordonia sihwaniensis RL-BY03, was identified and analyzed for its ability to degrade PAEs. Furthermore, the metabolic mechanism of di-(2-ethylhexyl) phthalate (DEHP) was examined through UPLC-MS/MS and genomic analysis. RL-BY03 could rely solely on several types of PAEs as its sole carbon source. Initial pH and temperature for DEHP degradation were optimized as 8.0 and 30 °C, respectively. Surprisingly, RL-BY03 could simultaneously degrade ethyl acetate and DEHP and they could increase the cell surface hydrophobicity. DEHP degradation kinetics fitted well with the first-order decay model. The metabolic pathway of DEHP was deduced following the detection of five metabolic intermediates. Further, genes that are related to DEHP degradation were identified through genomic analysis and their expression levels were validated through RT-qPCR. A co-related metabolic pathway at biochemical and molecular level indicated that DEHP was turned into DBP and DEP by β-oxidation, which was further hydrolyzed into phthalic acid. Phthalic acid was utilized through catechol branch of β-ketoadipate pathway. Additionally, RL-BY03 exhibited excellent bioremediation potential for DEHP-contaminated marine samples. In general, these findings have the potential to enhance our understanding of the fate of PAEs in marine ecosystems.
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