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Issue DateTitleAuthor(s)
2022-01-01Phylogenomic diversity of Vibrio species and other Gammaproteobacteria isolated from Pacific oysters (Crassostrea gigas) during a summer mortality outbreakWorden, PJ; Bogema, DR; Micallef, ML; Go, J; Deutscher, AT; Labbate, M; Green, TJ; King, WL; Liu, M; Seymour, JR; Jenkins, C
2021-08-09Post-weaning shifts in microbiome composition and metabolism revealed by over 25 000 pig gut metagenome-assembled genomes.Gaio, D; DeMaere, MZ; Anantanawat, K; Chapman, TA; Djordjevic, SP; Darling, AE
2021-12Genomic comparisons of Escherichia coli ST131 from Australia.Li, D; Wyrsch, ER; Elankumaran, P; Dolejska, M; Marenda, MS; Browning, GF; Bushell, RN; McKinnon, J; Chowdhury, PR; Hitchick, N; Miller, N; Donner, E; Drigo, B; Baker, D; Charles, IG; Kudinha, T; Jarocki, VM; Djordjevic, SP
2021-06Enhancing genomics-based outbreak detection of endemic Salmonella enterica serovar Typhimurium using dynamic thresholds.Payne, M; Octavia, S; Luu, LDW; Sotomayor-Castillo, C; Wang, Q; Tay, ACY; Sintchenko, V; Tanaka, MM; Lan, R
2020-11Analysis of complete Campylobacter concisus genomes identifies genomospecies features, secretion systems and novel plasmids and their association with severe ulcerative colitis.Liu, F; Chen, S; Luu, LDW; Lee, SA; Tay, ACY; Wu, R; Riordan, SM; Lan, R; Liu, L; Zhang, L
2022-09Changes to the upper gastrointestinal microbiotas of children with reflux oesophagitis and oesophageal metaplasia.Luu, LDW; Singh, H; Castaño-Rodríguez, N; Leach, ST; Riordan, SM; Tedla, N; Krishnan, U; Kaakoush, NO
2020-01Whole genome analysis of ExPEC ST73 from a single hospital over a 2-year period identified different circulating clonal groupsBogema, DR; McKinnon, J; Liu, M; Hitchick, N; Miller, N; Venturini, C; Iredell, J; Darling, AE; Roy Chowdury, P; Djordjevic, SP
2022-01Hackflex: low-cost, high-throughput, Illumina Nextera Flex library construction.Gaio, D; Anantanawat, K; To, J; Liu, M; Monahan, L; Darling, AE
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