Browsing byAuthorDeMaere, MZ

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Showing results 1 to 15 of 15
Issue DateTitleAuthor(s)
2021-06-03A large-scale metagenomic survey dataset of the post-weaning piglet gut lumenGaio, D; DeMaere, MZ; Anantanawat, K; Eamens, GJ; Liu, M; Zingali, T; Falconer, L; Chapman, TA; Djordjevic, SP; Darling, AE
2018-04-13CAMISIM: Simulating metagenomes and microbial communitiesDarling, AE; Fritz, A; Hofmann, P; Majda, S; Dahms, E; Droge, J; Fiedler, J; Lesker, TR; Belmann, P; DeMaere, MZ; Sczyrba, A; Bremges, A; McHardy, AC
2019-03-26Complete Sequences of Multiple-Drug Resistant IncHI2 ST3 Plasmids in Escherichia coli of Porcine Origin in AustraliaWyrsch, ER; Reid, CJ; DeMaere, MZ; Liu, MY; Chapman, TA; Roy Chowdhury, P; Djordjevic, SP
2016-01-01Deconvoluting simulated metagenomes: The performance of hard- and softclustering algorithms applied to metagenomic chromosome conformation capture (3C)DeMaere, MZ; Darling, AE
2017-01-01Evaluation of ddRADseq for reduced representation metagenome sequencingLiu, MY; Worden, P; Monahan, LG; DeMaere, MZ; Burke, CM; Djordjevic, SP; Charles, IG; Darling, AE
2018-06-20Genomic variation and biogeography of Antarctic haloarchaeaTschitschko, B; Erdmann, S; DeMaere, MZ; Roux, S; Panwar, P; Allen, MA; Williams, TJ; Brazendale, S; Hancock, AM; Eloe-Fadrosh, EA; Cavicchioli, R
2019-03-01Identification of a novel lineage of plasmids within phylogenetically diverse subclades of IncHI2-ST1 plasmidsRoy Chowdhury, P; Fourment, M; DeMaere, MZ; Monahan, L; Merlino, J; Gottlieb, T; Darling, AE; Djordjevic, SP
2020-02-06Metagenomic Hi-C of a Healthy Human Fecal Microbiome Transplant Donor.DeMaere, MZ; Liu, MYZ; Lin, E; Djordjevic, SP; Charles, IG; Worden, P; Burke, CM; Monahan, LG; Gardiner, M; Borody, TJ; Darling, AE
2022Phylogenetic diversity analysis of shotgun metagenomic reads describes gut microbiome development and treatment effects in the post-weaned pig.Gaio, D; DeMaere, MZ; Anantanawat, K; Eamens, GJ; Falconer, L; Chapman, TA; Djordjevic, S; Darling, AE
2021-08-09Post-weaning shifts in microbiome composition and metabolism revealed by over 25 000 pig gut metagenome-assembled genomes.Gaio, D; DeMaere, MZ; Anantanawat, K; Chapman, TA; Djordjevic, SP; Darling, AE
2021-10qc3C: Reference-free quality control for Hi-C sequencing data.DeMaere, MZ; Darling, AE
2023-03Rhometa: Population recombination rate estimation from metagenomic read datasets.Krishnan, S; DeMaere, MZ; Beck, D; Ostrowski, M; Seymour, JR; Darling, AE; Didelot, X
2018-01-01Sim3C: Simulation of Hi-C and Meta3C proximity ligation sequencing technologiesDeMaere, MZ; Darling, AE
2011-09-01Simple high-throughput annotation pipeline (SHAP)DeMaere, MZ; Lauro, FM; Thomas, T; Yau, S; Cavicchioli, R
2011-04-12Virophage control of antarctic algal host-virus dynamicsYau, S; Lauro, FM; DeMaere, MZ; Brown, MV; Thomas, T; Raftery, MJ; Andrews-Pfannkoch, C; Lewis, M; Hoffman, JM; Gibson, JA; Cavicchioli, R