Allele frequency data for 15 autosomal STR loci in eight Indonesian subpopulations.

Venables, SJ; Daniel, R; Sarre, SD; Soedarsono, N; Sudoyo, H; Suryadi, H; van Oorschot, RAH; Walsh, SJ; Widodo, PT; McNevin, D

Allele frequency data for 15 autosomal STR loci in eight Indonesian subpopulations.

Venables, SJ Daniel, R Sarre, SD Soedarsono, N Sudoyo, H Suryadi, H van Oorschot, RAH Walsh, SJ Widodo, PT McNevin, D

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Publisher:: ELSEVIER IRELAND LTD
Publication Type:: Journal Article
Citation:: Forensic Sci Int Genet, 2016, 20, pp. 45-52
Issue Date:: 2016-01

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Field	Value	Language
dc.contributor.author	Venables, SJ
dc.contributor.author	Daniel, R
dc.contributor.author	Sarre, SD
dc.contributor.author	Soedarsono, N
dc.contributor.author	Sudoyo, H
dc.contributor.author	Suryadi, H
dc.contributor.author	van Oorschot, RAH
dc.contributor.author	Walsh, SJ
dc.contributor.author	Widodo, PT
dc.contributor.author	McNevin, D https://orcid.org/0000-0003-1665-3367
dc.date.accessioned	2022-01-31T22:44:19Z
dc.date.available	2015-09-27
dc.date.available	2022-01-31T22:44:19Z
dc.date.issued	2016-01
dc.identifier.citation	Forensic Sci Int Genet, 2016, 20, pp. 45-52
dc.identifier.issn	1872-4973
dc.identifier.issn	1878-0326
dc.identifier.uri	http://hdl.handle.net/10453/154005
dc.description.abstract	Evolutionary and cultural history can affect the genetic characteristics of a population and influences the frequency of different variants at a particular genetic marker (allele frequency). These characteristics directly influence the strength of forensic DNA evidence and make the availability of suitable allele frequency information for every discrete country or jurisdiction highly relevant. Population sub-structure within Indonesia has not been well characterised but should be expected given the complex geographical, linguistic and cultural architecture of the Indonesian population. Here we use forensic short tandem repeat (STR) markers to identify a number of distinct genetic subpopulations within Indonesia and calculate appropriate population sub-structure correction factors. This data represents the most comprehensive investigation of population sub-structure within Indonesia to date using these markers. The results demonstrate that significant sub-structure is present within the Indonesian population and must be accounted for using island specific allele frequencies and corresponding sub-structure correction factors in the calculation of forensic DNA match statistics.
dc.format	Print-Electronic
dc.language	eng
dc.publisher	ELSEVIER IRELAND LTD
dc.relation.ispartof	Forensic Sci Int Genet
dc.relation.isbasedon	10.1016/j.fsigen.2015.09.014
dc.rights	info:eu-repo/semantics/closedAccess
dc.subject	01 Mathematical Sciences, 06 Biological Sciences, 18 Law and Legal Studies
dc.subject.classification	Legal & Forensic Medicine
dc.subject.mesh	Asians
dc.subject.mesh	DNA Fingerprinting
dc.subject.mesh	Ethnicity
dc.subject.mesh	Gene Frequency
dc.subject.mesh	Genetic Loci
dc.subject.mesh	Genetic Markers
dc.subject.mesh	Genetics, Population
dc.subject.mesh	Humans
dc.subject.mesh	Indonesia
dc.subject.mesh	Microsatellite Repeats
dc.subject.mesh	Polymerase Chain Reaction
dc.subject.mesh	Humans
dc.subject.mesh	Genetic Markers
dc.subject.mesh	DNA Fingerprinting
dc.subject.mesh	Polymerase Chain Reaction
dc.subject.mesh	Genetics, Population
dc.subject.mesh	Microsatellite Repeats
dc.subject.mesh	Gene Frequency
dc.subject.mesh	Indonesia
dc.subject.mesh	Genetic Loci
dc.subject.mesh	Ethnicity
dc.subject.mesh	Asians
dc.title	Allele frequency data for 15 autosomal STR loci in eight Indonesian subpopulations.
dc.type	Journal Article
utslib.citation.volume	20
utslib.location.activity	Netherlands
utslib.for	01 Mathematical Sciences
utslib.for	06 Biological Sciences
utslib.for	18 Law and Legal Studies
pubs.organisational-group	/University of Technology Sydney
pubs.organisational-group	/University of Technology Sydney/Faculty of Science
pubs.organisational-group	/University of Technology Sydney/Strength - CFS - Centre for Forensic Science
pubs.organisational-group	/University of Technology Sydney/Faculty of Science/School of Mathematical and Physical Sciences
utslib.copyright.status	closed_access	*
dc.date.updated	2022-01-31T22:44:18Z
pubs.publication-status	Published
pubs.volume	20

Abstract:

Evolutionary and cultural history can affect the genetic characteristics of a population and influences the frequency of different variants at a particular genetic marker (allele frequency). These characteristics directly influence the strength of forensic DNA evidence and make the availability of suitable allele frequency information for every discrete country or jurisdiction highly relevant. Population sub-structure within Indonesia has not been well characterised but should be expected given the complex geographical, linguistic and cultural architecture of the Indonesian population. Here we use forensic short tandem repeat (STR) markers to identify a number of distinct genetic subpopulations within Indonesia and calculate appropriate population sub-structure correction factors. This data represents the most comprehensive investigation of population sub-structure within Indonesia to date using these markers. The results demonstrate that significant sub-structure is present within the Indonesian population and must be accounted for using island specific allele frequencies and corresponding sub-structure correction factors in the calculation of forensic DNA match statistics.

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http://hdl.handle.net/10453/154005