Reordering contigs of draft genomes using the Mauve Aligner

Rissman, AI; Mau, B; Biehl, BS; Darling, AE; Glasner, JD; Perna, NT

Reordering contigs of draft genomes using the Mauve Aligner

Rissman, AI Mau, B Biehl, BS Darling, AE

Glasner, JD Perna, NT

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Publication Type:: Journal Article
Citation:: Bioinformatics, 2009, 25 (16), pp. 2071 - 2073
Issue Date:: 2009-08-01

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Field	Value	Language
dc.contributor.author	Rissman, AI	en_US
dc.contributor.author	Mau, B	en_US
dc.contributor.author	Biehl, BS	en_US
dc.contributor.author	Darling, AE https://orcid.org/0000-0003-2397-7925	en_US
dc.contributor.author	Glasner, JD	en_US
dc.contributor.author	Perna, NT	en_US
dc.date.issued	2009-08-01	en_US
dc.identifier.citation	Bioinformatics, 2009, 25 (16), pp. 2071 - 2073	en_US
dc.identifier.issn	1367-4803	en_US
dc.identifier.uri	http://hdl.handle.net/10453/30732
dc.description.abstract	Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results. © 2009 The Author(s).	en_US
dc.relation.ispartof	Bioinformatics	en_US
dc.relation.isbasedon	10.1093/bioinformatics/btp356	en_US
dc.subject.classification	Bioinformatics	en_US
dc.subject.mesh	Contig Mapping	en_US
dc.subject.mesh	Sequence Alignment	en_US
dc.subject.mesh	Sequence Analysis, DNA	en_US
dc.subject.mesh	Genome	en_US
dc.subject.mesh	Algorithms	en_US
dc.subject.mesh	Software	en_US
dc.title	Reordering contigs of draft genomes using the Mauve Aligner	en_US
dc.type	Journal Article
utslib.citation.volume	16	en_US
utslib.citation.volume	25	en_US
utslib.for	01 Mathematical Sciences	en_US
utslib.for	06 Biological Sciences	en_US
utslib.for	08 Information and Computing Sciences	en_US
pubs.embargo.period	Not known	en_US
pubs.organisational-group	/University of Technology Sydney
pubs.organisational-group	/University of Technology Sydney/Faculty of Science
pubs.organisational-group	/University of Technology Sydney/Strength - ithree - Institute of Infection, Immunity and Innovation
utslib.copyright.status	closed_access
pubs.issue	16	en_US
pubs.publication-status	Published	en_US
pubs.volume	25	en_US

Abstract:

Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results. © 2009 The Author(s).

Please use this identifier to cite or link to this item:

http://hdl.handle.net/10453/30732